Role in BKOEdit
After thier unsuccessful visit to Queen Corellia, Sagi is ordered by Verus to go back to Alfard, but Milly wants to go to the School of Magic first, as she had studied there before. After a brief visit to the school, the party goes back to the Holoholo Jungle, hoping that the repairs in the Sfida are ready.
When the party needs to cross the Holoholo Jungle for getting to Opu, they ask the School's headmaster for a Landmark Stone, an item that prevents getting lost in the jungle. However, she asks for credits in magic, chemistry and classics subjects before giving away the stone. After getting the three credits, the headmaster gives to Sagi the Landmark Stone.It is also stated in various parts of the game that Milly wasn't a very good student in the School of Magic, falling asleep in boring classes, specially in the Extinct Magical Creatures class.
Also, the School of Magic's ellection sidequest happens here.
Role in BKEWEdit
Just as in Baten Kaitos Origins, the party visits the School of Magicfor asking the headmaster for a Landmark Stone. However, she hands them the stone right away.
Later in the game, you may visit the School of Magic for getting into the Illussory Fortress of the Book.